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How to correct an oncology record and open a pull request with On Co

Edit a record in the corpus, run the checks and submit a change that passes the same safety gate.

  • Research
  • Intermediate
  • 60 minutes
  • From the README
  • Any agent

Who it is forA clinician, scientist or patient advocate who has found an error or a missing fact in a record on the site.

The problemOutdated or wrong oncology facts stay online unless someone with the source in hand fixes the record in the open.

The outcomeA pull request that corrects the record, cites its source, and passes validation, type checks, lint, tests and build.

What you need first

  • Node.js and npm (inferred, needed for the repository scripts)
  • Git and a GitHub account for cloning the repository or opening issues and pull requests
  • An MCP-capable client or agent for the MCP server (optional)

Steps

  1. Clone the repository with git clone https://github.com/judegomila/OnCo and enter the folder. (inferred, check the README)
  2. Open an issue first, since the site's forms prefill it, and note the triaged issue number.
  3. Edit the record in the matching file under src/data/ and set its asOf date and a primary links entry.
  4. Run npm run validate and fix any duplicate ids, dangling references or malformed records it reports.
  5. Run npm run typecheck && npm run lint && npm test && npm run build, then open the pull request referencing the issue.

Prompt for your agent

In a local clone of judegomila/OnCo, update the record with id <record id> in src/data/ so that it matches the primary source <source URL>, set asOf to today's date, and run `npm run validate`. Expected output is a clean validation report and a diff limited to that record. Verify that the new link resolves and that no other record changed.

Caveat. The README says no personal or patient data belongs in the repository, so corrections must cite public sources about science, products and organisations only.

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